4A7D	Hydrolase	date	Nov 14, 2011
title	X-Ray Crystal Structure Of Hewl Flash-Cooled At High Pressur
authors	A.Burkhardt, M.Warmer, S.Panneerselvam, A.Wagner, R.Reimer, H.Hoh A.Meents
compound		source
Molecule: Lysozyme C Chain: A Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv, Allergen=Gal D 4, Hen Egg-White Lysozyme; Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031
symmetry	Space Group: P 43 21 2	R_factor 0.175 R_Free 0.203
crystal cell	length a length b length c angle alpha angle beta angle gamma 77.222 77.222 37.007 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	CL, NA	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Fast high-pressure freezing of protein crystals in their mother liquor., Burkhardt A, Warmer M, Panneerselvam S, Wagner A, Zouni A, Glockner C, Reimer R, Hohenberg H, Meents A, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Apr 1;68(Pt 4):495-500., Epub 2012 Mar 31. PMID:22505429

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (4a7d.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 4A7D CSU: Contacts of Structural Units for 4A7D Structure Factors (238 Kb) Retrieve 4A7D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4A7D from S2C, [Save to disk] Re-refined 4a7d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4A7D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4A7D

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4A7D, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4a7d_A] [4a7d] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4A7D: [LYZ1 ] by SMART

Other resources with information on 4A7D

Community annotation for 4A7D at PDBWiki (http://pdbwiki.org)

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