4A8X	Transcription	date	Nov 21, 2011
title	Structure Of The Core Asap Complex
authors	A.G.Murachelli, J.Ebert, C.Basquin, H.Le Hir, E.Conti
compound		source
Molecule: Rna-Binding Protein With Serine-Rich Domain 1 Chain: A Fragment: Rrm Domain, Residues 122-207 Synonym: Rnps1, Sr-Related Protein Ldc2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_plasmid: Pet Series
Molecule: Hook-Like, Isoform A Chain: B Fragment: Rsb Domain, Residues 648-687 Synonym: Acinus, Hook-Like, Isoform B, Ld23757p Engineered: Yes		Organism_scientific: Drosophila Melanogaster Organism_common: Human Fly Organism_taxid: 7227 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_plasmid: Pet Series
Molecule: Histone Deacetylase Complex Subunit Sap18 Chain: C Fragment: Residues 14-143 Synonym: Sap18,18 Kda Sin3-Associated Polypeptide, Sin3-Ass Polypeptide P18; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Human Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_plasmid: Pet Series
symmetry	Space Group: P 1 21 1	R_factor 0.186 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.868 73.331 50.754 90.00 110.99 90.00
method	X-Ray Diffraction	resolution	1.90 Å
note	4A8X is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	The structure of the ASAP core complex reveals the existence of a Pinin-containing PSAP complex., Murachelli AG, Ebert J, Basquin C, Le Hir H, Conti E, Nat Struct Mol Biol. 2012 Mar 4;19(4):378-86. doi: 10.1038/nsmb.2242. PMID:22388736

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk] Biological Unit Coordinates (4a8x.pdb1.gz) 115 Kb CSU: Contacts of Structural Units for 4A8X Structure Factors (1048 Kb) Retrieve 4A8X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4A8X from S2C, [Save to disk] Re-refined 4a8x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4A8X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4A8X

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4A8X, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4a8x_C] [4a8x_A] [4a8x] [4a8x_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4A8X: [RRM ] by SMART

Other resources with information on 4A8X

Community annotation for 4A8X at PDBWiki (http://pdbwiki.org)

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