4AFI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PR enzyme
Primary referenceStructural basis of the intracellular sorting of the SNARE VAMP7 by the AP3 adaptor complex., Kent HM, Evans PR, Schafer IB, Gray SR, Sanderson CM, Luzio JP, Peden AA, Owen DJ, Dev Cell. 2012 May 15;22(5):979-88. Epub 2012 Apr 19. PMID:22521722
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (4afi.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4AFI
  • CSU: Contacts of Structural Units for 4AFI
  • Structure Factors (601 Kb)
  • Retrieve 4AFI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AFI from S2C, [Save to disk]
  • Re-refined 4afi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4AFI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4afi] [4afi_A] [4afi_B]
  • SWISS-PROT database:
  • Domains found in 4AFI: [BLVR] [Longin ] by SMART

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