4AFJ Transferase Peptide date Jan 19, 2012
title 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk- Inhibitors
authors G.Gentile, G.Merlo, A.Pozzan, G.Bernasconi, B.Bax, P.Bamborough, A P.Carter, M.Neu, G.Yao, C.Brough, G.Cutler, A.Coffin, S.Belyanska
compound source
Molecule: Glycogen Synthase Kinase-3 Beta
Chain: A, B
Fragment: Residues 27-393
Synonym: Gsk3-Beta, Serinethreonine-Protein Kinase Gsk3b
Ec: 2.7.11.26, 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus

Molecule: Proto-Oncogene Frat1
Chain: X, Y
Fragment: Residues 197-226
Synonym: Frequently Rearranged In Advanced T-Cell Lymphomas 1;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: H 3 2
R_factor 0.178 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.317 152.317 199.054 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.98 Å
ligand GOL, PTR, SJJ, SO4 enzyme Transferase E.C.2.7.11.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary reference5-Aryl-4-carboxamide-1,3-oxazoles: Potent and selective GSK-3 inhibitors., Gentile G, Merlo G, Pozzan A, Bernasconi G, Bax B, Bamborough P, Bridges A, Carter P, Neu M, Yao G, Brough C, Cutler G, Coffin A, Belyanskaya S, Bioorg Med Chem Lett. 2012 Mar 1;22(5):1989-94. Epub 2012 Jan 21. PMID:22310227
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (264 Kb) [Save to disk]
  • Biological Unit Coordinates (4afj.pdb1.gz) 131 Kb
  • Biological Unit Coordinates (4afj.pdb2.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 4AFJ
  • CSU: Contacts of Structural Units for 4AFJ
  • Structure Factors (489 Kb)
  • Retrieve 4AFJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AFJ from S2C, [Save to disk]
  • Re-refined 4afj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AFJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AFJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AFJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4afj_X] [4afj_A] [4afj] [4afj_Y] [4afj_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4AFJ: [S_TKc ] by SMART
  • Other resources with information on 4AFJ
  • Community annotation for 4AFJ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science