4AIY Hormone Growth Factor date Dec 29, 1998
title R6 Human Insulin Hexamer (Symmetric), Nmr, 'Green' Substate, Average Structure
authors S.I.O'Donoghue, X.Chang, R.Abseher, M.Nilges, J.J.Led
compound source
Molecule: Protein (Insulin)
Chain: A, C, E, G, I, K
Fragment: Alpha Chain
Engineered: Yes
Other_details: A Phenol Molecule Is Non-Covalently Attached To Each Insulin Monomer;
Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized From The Secretion Of Human (Homo Sapiens) Pancreatic Cells.;

Molecule: Protein (Insulin)
Chain: B, D, F, H, J, L
Fragment: Beta Chain
Engineered: Yes
Other_details: A Phenol Molecule Is Non-Covalently Attached To Each Insulin Monomer

Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized From The Secretion Of Human (Homo Sapiens) Pancreatic Cells.
methodSolution NMR
ligand IPH enzyme
related structures by homologous chain: 1KMF, 1LNP
Primary referenceUnraveling the symmetry ambiguity in a hexamer: calculation of the R6 human insulin structure., O'Donoghue SI, Chang X, Abseher R, Nilges M, Led JJ, J Biomol NMR 2000 Feb;16(2):93-108. PMID:10723989
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 4AIY
  • CSU: Contacts of Structural Units for 4AIY
  • Retrieve 4AIY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AIY from S2C, [Save to disk]
  • View 4AIY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AIY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4AIY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4aiy.1, region B:,A [Jmol] [rasmolscript] [script source]
        - Domain d4aiy.2, region D:,C [Jmol] [rasmolscript] [script source]
        - Domain d4aiy.3, region F:,E [Jmol] [rasmolscript] [script source]
        - Domain d4aiy.4, region H:,G [Jmol] [rasmolscript] [script source]
        - Domain d4aiy.5, region J:,I [Jmol] [rasmolscript] [script source]
        - Domain d4aiy.6, region L:,K [Jmol] [rasmolscript] [script source]
  • Fold representative 4aiy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4aiy_C] [4aiy_K] [4aiy_E] [4aiy_G] [4aiy_J] [4aiy_A] [4aiy_I] [4aiy_F] [4aiy_L] [4aiy] [4aiy_H] [4aiy_B] [4aiy_D]
  • SWISS-PROT database: [P01308]
  • Domain organization of [INS_HUMAN] by SWISSPFAM
  • Domain found in 4AIY: [IlGF ] by SMART
  • Other resources with information on 4AIY
  • Community annotation for 4AIY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 4AIY from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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