4AOW Receptor date Mar 30, 2012
title Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom
authors D.Ruiz Carrillo, R.Chandrasekaran, M.Nilsson, T.Cornvick, C.W.Li S.M.Tan, J.Lescar
compound source
Molecule: Guanine Nucleotide-Binding Protein Subunit Beta-2
Chain: A, B, C
Synonym: Receptor For Activated C Kinase 1, Cell Proliferation-Induci Guanine Nucleotide-Binding Protein Su Beta-Like Protein 12.3, Human Lung Cancer Oncogene 7 Prote Hlc-7, Receptor For Activated C Kinase, Receptor Of Activa Protein Kinase C 1, Rack1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta T1r
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 41 21 2
R_factor 0.1930 R_Free 0.2142
crystal
cell
length a length b length c angle alpha angle beta angle gamma
134.260 134.260 135.186 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure of human Rack1 protein at a resolution of 2.45 A., Ruiz Carrillo D, Chandrasekaran R, Nilsson M, Cornvik T, Liew CW, Tan SM, Lescar J, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Aug 1;68(Pt 8):867-72., Epub 2012 Jul 26. PMID:22869111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (302 Kb) [Save to disk]
  • Biological Unit Coordinates (4aow.pdb1.gz) 101 Kb
  • Biological Unit Coordinates (4aow.pdb2.gz) 99 Kb
  • Biological Unit Coordinates (4aow.pdb3.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 4AOW
  • CSU: Contacts of Structural Units for 4AOW
  • Structure Factors (806 Kb)
  • Retrieve 4AOW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AOW from S2C, [Save to disk]
  • Re-refined 4aow structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AOW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AOW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4AOW, from MSDmotif at EBI
  • Fold representative 4aow from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4aow_A] [4aow] [4aow_C] [4aow_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4AOW: [WD40 ] by SMART
  • Alignments of the sequence of 4AOW with the sequences similar proteins can be viewed for 4AOW's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.
  • Other resources with information on 4AOW
  • Community annotation for 4AOW at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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