OCA Atlas for 4ASK

4ASK

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CO, K0I, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response., Kruidenier L, Chung CW, Cheng Z, Liddle J, Che K, Joberty G, Bantscheff M, Bountra C, Bridges A, Diallo H, Eberhard D, Hutchinson S, Jones E, Katso R, Leveridge M, Mander PK, Mosley J, Ramirez-Molina C, Rowland P, Schofield CJ, Sheppard RJ, Smith JE, Swales C, Tanner R, Thomas P, Tumber A, Drewes G, Oppermann U, Patel DJ, Lee K, Wilson DM, Nature. 2012 Jul 29. doi: 10.1038/nature11262. PMID:22842901

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk]

Biological Unit Coordinates (4ask.pdb1.gz) 152 Kb

Biological Unit Coordinates (4ask.pdb2.gz) 150 Kb

LPC: Ligand-Protein Contacts for 4ASK

CSU: Contacts of Structural Units for 4ASK

Structure Factors (615 Kb)

Retrieve 4ASK in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4ASK from S2C, [Save to disk]

Re-refined 4ask structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4ASK in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ask] [4ask_A] [4ask_B]

SWISS-PROT database:

Domain found in 4ASK: [JmjC ] by SMART

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