4AUV Apoptosis date May 22, 2012
title Crystal Structure Of The Brms1 N-Terminal Region
authors M.Spinola-Amilibia, J.Rivera, M.Ortiz-Lombardia, A.Romero, J.L.N J.Bravo
compound source
Molecule: Breast Cancer Metastasis Suppressor 1
Chain: A, B, C, D, E, F, G, H
Fragment: Residues 51-84
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta Plyss
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet28-6xhis_smt3
Expression_system_plasmid: Pet28-6xhis-Smt3brms151-84
symmetry Space Group: C 2 2 21
R_factor 0.193 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.636 191.274 71.940 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACY, CL, SO4 enzyme
Primary referenceBRMS1 and BRMS1 Are Crystal Oligomeric Coiled Coils with Different Oligomerization States, Which Behave as Disordered Protein Fragments in Solution., Spinola-Amilibia M, Rivera J, Ortiz-Lombardia M, Romero A, Neira JL, Bravo J, J Mol Biol. 2013 Mar 13. pii: S0022-2836(13)00152-6. doi:, 10.1016/j.jmb.2013.03.005. PMID:23500495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (4auv.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (4auv.pdb2.gz) 83 Kb
  • Biological Unit Coordinates (4auv.pdb3.gz) 45 Kb
  • Biological Unit Coordinates (4auv.pdb4.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 4AUV
  • CSU: Contacts of Structural Units for 4AUV
  • Structure Factors (288 Kb)
  • Retrieve 4AUV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4AUV from S2C, [Save to disk]
  • Re-refined 4auv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4AUV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4AUV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4AUV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4auv_C] [4auv_D] [4auv] [4auv_G] [4auv_A] [4auv_H] [4auv_E] [4auv_B] [4auv_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4AUV
  • Community annotation for 4AUV at PDBWiki (http://pdbwiki.org)

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