4B0T		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP, MG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway., Ozcelik D, Barandun J, Schmitz N, Sutter M, Guth E, Damberger FF, Allain FH, Ban N, Weber-Ban E, Nat Commun. 2012 Aug 21;3:1014. doi: 10.1038/ncomms2009. PMID:22910360

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (318 Kb) [Save to disk] Biological Unit Coordinates (4b0t.pdb1.gz) 311 Kb LPC: Ligand-Protein Contacts for 4B0T CSU: Contacts of Structural Units for 4B0T Structure Factors (1272 Kb) Retrieve 4B0T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4B0T from S2C, [Save to disk] Re-refined 4b0t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4B0T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4b0t] [4b0t_A] [4b0t_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---