4B2I	Hydrolase	date	Jul 16, 2012
title	Humanised Monomeric Rada In Complex With Indazole
authors	D.E.Scott, M.T.Ehebauer, T.Pukala, M.Marsh, T.L.Blundell, A.R.Venkitaraman, C.Abell, M.Hyvonen
compound		source
Molecule: Dna Repair And Recombination Protein Rada Chain: A Fragment: Atpase, Residues 108-349 Engineered: Yes Mutation: Yes		Organism_scientific: Pyrococcus Furiosus Organism_taxid: 2261 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Containing Pubs520 Plasmid Expression_system_vector_type: Plasmid Expression_system_plasmid: Pbat4
symmetry	Space Group: P 1 21 1	R_factor 0.199 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.620 78.770 39.630 90.00 118.06 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	LZ1, PO4 BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Using a Fragment-Based Approach To Target Protein-Protein Interactions., Scott DE, Ehebauer MT, Pukala T, Marsh M, Blundell TL, Venkitaraman AR, Abell C, Hyvonen M, Chembiochem. 2013 Jan 23. doi: 10.1002/cbic.201200521. PMID:23344974

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (4b2i.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 4B2I CSU: Contacts of Structural Units for 4B2I Structure Factors (533 Kb) Retrieve 4B2I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4B2I from S2C, [Save to disk] Re-refined 4b2i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4B2I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4B2I

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4B2I, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4b2i_A] [4b2i] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4B2I: [AAA ] by SMART

Other resources with information on 4B2I

Community annotation for 4B2I at PDBWiki (http://pdbwiki.org)

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