4B2T Chaperone date Jul 17, 2012
title The Crystal Structures Of The Eukaryotic Chaperonin Cct Reve Functional Partitioning
authors N.Kalisman, G.F.Schroeder, M.Levitt
compound source
Molecule: T-Complex Protein 1 Subunit Alpha
Chain: A, a
Synonym: Tcp-1-Alpha, Cct-Alpha
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Beta
Chain: B, b
Synonym: Tcp-1-Beta, Cct-Beta
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Delta
Chain: D, d
Synonym: Tcp-1-Delta, Cct-Delta
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Epsilon
Chain: E, e
Synonym: Tcp-1-Epsilon, Cct-Epsilon
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Gamma
Chain: G, g
Synonym: Tcp-1-Gamma, Cct-Gamma
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Eta
Chain: H, h
Synonym: Tcp-1-Eta, Cct-Eta
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Theta
Chain: Q, q
Synonym: Tcp-1-Theta, Cct-Theta
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes

Molecule: T-Complex Protein 1 Subunit Zeta
Chain: Z, z
Synonym: Tcp-1-Zeta, Cct-Zeta, Cct-Zeta-1
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Testes
symmetry Space Group: P 21 21 2
R_factor 0.340 R_Free 0.399
crystal
cell
length a length b length c angle alpha angle beta angle gamma
272.700 313.500 158.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 5.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A, a


B, b


H, h


Q, q


Z, z


d, D


e, E


g, G


Primary referenceThe Crystal Structures of the Eukaryotic Chaperonin CCT Reveal Its Functional Partitioning., Kalisman N, Schroder GF, Levitt M, Structure. 2013 Mar 5. pii: S0969-2126(13)00039-7. doi:, 10.1016/j.str.2013.01.017. PMID:23478063
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (909 Kb) [Save to disk]
  • Biological Unit Coordinates (4b2t.pdb1.gz) 895 Kb
  • CSU: Contacts of Structural Units for 4B2T
  • Structure Factors (511 Kb)
  • Retrieve 4B2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B2T from S2C, [Save to disk]
  • Re-refined 4b2t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4B2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4B2T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B2T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b2t_E] [4b2t_H] [4b2t_D] [4b2t_Q] [4b2t] [4b2t_d] [4b2t_Z] [4b2t_e] [4b2t_h] [4b2t_G] [4b2t_g] [4b2t_z] [4b2t_A] [4b2t_q] [4b2t_b] [4b2t_a] [4b2t_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4B2T
  • Community annotation for 4B2T at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science