4B5O Transferase date Aug 07, 2012
title Crystal Structure Of Human Alpha Tubulin Acetyltransferase Catalytic Domain
authors M.Taschner, M.Vetter, E.Lorentzen
compound source
Molecule: Alpha-Tubulin N-Acetyltransferase
Chain: A
Fragment: Catalytic Domain, Residues 1-196
Synonym: Alpha-Tubulin Acetyltransferase, Alpha-Tat, Tat, Acetyltransferase Mec-17 Homolog;
Ec: 2.3.1.108
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
symmetry Space Group: P 21 21 2
R_factor 0.1306 R_Free 0.1574
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.198 121.958 37.277 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.05 Å
ligand ACO, NA enzyme Transferase E.C.2.3.1.108 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic resolution structure of human alpha-tubulin acetyltransferase bound to acetyl-CoA., Taschner M, Vetter M, Lorentzen E, Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19649-54. doi:, 10.1073/pnas.1209343109. Epub 2012 Oct 15. PMID:23071318
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (4b5o.pdb1.gz) 251 Kb
  • LPC: Ligand-Protein Contacts for 4B5O
  • CSU: Contacts of Structural Units for 4B5O
  • Structure Factors (1184 Kb)
  • Retrieve 4B5O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B5O from S2C, [Save to disk]
  • Re-refined 4b5o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4B5O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4B5O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B5O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b5o] [4b5o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4B5O
  • Community annotation for 4B5O at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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