4B5P Transferase date Aug 07, 2012
title Crystal Structure Of Human Alpha Tubulin Acetyltransferase C Domain Q58a Variant
authors M.Taschner, M.Vetter, E.Lorentzen
compound source
Molecule: Alpha-Tubulin N-Acetyltransferase
Chain: A
Fragment: Catalytic Domain, Residues 1-196
Synonym: Alpha-Tubulin Acetyltransferase, Alpha-Tat, Tat, Acetyltransferase Mec-17 Homolog;
Ec: 2.3.1.108
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet

Molecule: Alpha-Tubulin N-Acetyltransferase
Chain: B
Fragment: Catalytic Domain, Residues 1-196
Synonym: Alpha-Tubulin Acetyltransferase, Alpha-Tat, Tat, Acetyltransferase Mec-17 Homolog;
Ec: 2.3.1.108
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.760 110.870 113.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand ACO, NA enzyme Transferase E.C.2.3.1.108 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAtomic resolution structure of human alpha-tubulin acetyltransferase bound to acetyl-CoA., Taschner M, Vetter M, Lorentzen E, Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19649-54. doi:, 10.1073/pnas.1209343109. Epub 2012 Oct 15. PMID:23071318
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (4b5p.pdb1.gz) 186 Kb
  • LPC: Ligand-Protein Contacts for 4B5P
  • CSU: Contacts of Structural Units for 4B5P
  • Structure Factors (984 Kb)
  • Retrieve 4B5P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B5P from S2C, [Save to disk]
  • Re-refined 4b5p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4B5P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4B5P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B5P, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b5p_B] [4b5p] [4b5p_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4B5P
  • Community annotation for 4B5P at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science