4B6U Translation date Aug 15, 2012
title Solution Structure Of Eif4e3 In Complex With M7gdp
authors M.J.Osborne, L.Volpon, J.A.Kornblatt, B.Culkjovic-Kraljcic, A.Ba K.L.B.Borden
compound source
Molecule: Eukaryotic Translation Initiation Factor 4e Type
Chain: A
Synonym: Eif-4e Type 3, Eif-4e3, Eif4e Type 3, Eif4e-3
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand M7G enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceeIF4E3 acts as a tumor suppressor by utilizing an atypical mode of methyl-7-guanosine cap recognition., Osborne MJ, Volpon L, Kornblatt JA, Culjkovic-Kraljacic B, Baguet A, Borden KL, Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):3877-82. doi:, 10.1073/pnas.1216862110. Epub 2013 Feb 19. PMID:23431134
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (539 Kb) [Save to disk]
  • Biological Unit Coordinates (4b6u.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 4B6U
  • CSU: Contacts of Structural Units for 4B6U
  • Original NMR restraints for 4B6U from PDB
  • Retrieve 4B6U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B6U from S2C, [Save to disk]
    • View 4B6U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4B6U
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B6U, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b6u] [4b6u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4B6U
  • Community annotation for 4B6U at PDBWiki (http://pdbwiki.org)

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