4B80 Hydrolase date Aug 24, 2012
title Mus Musculus Acetylcholinesterase In Complex With N-(2-Dieth Ethyl)-1-(4-Fluoro-Phenyl)-Methanesulfonamide
authors C.D.Andersson, N.Forsgren, C.Akfur, A.Allgardsson, L.Berg, W.Qian F.Ekstrom, A.Linusson
compound source
Molecule: Acetylcholinesterase
Chain: A, B
Fragment: Catalytic Domain, Residues 32-574
Synonym: Ache
Ec: 3.1.1.7
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek 293f
Expression_system_plasmid: Pcdna3.1
symmetry Space Group: P 21 21 21
R_factor 0.187 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.867 111.543 227.589 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand A36, EDO, NAG, P4C, PEG, PGE, SO4 enzyme Hydrolase E.C.3.1.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDivergent Structure-Activity Relationships of Structurally Similar Acetylcholinesterase Inhibitors., Andersson CD, Forsgren N, Akfur C, Allgardsson A, Berg L, Engdahl C, Qian W, Ekstrom FJ, Linusson A, J Med Chem. 2013 Aug 28. PMID:23984975
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (362 Kb) [Save to disk]
  • Biological Unit Coordinates (4b80.pdb1.gz) 352 Kb
  • LPC: Ligand-Protein Contacts for 4B80
  • CSU: Contacts of Structural Units for 4B80
  • Structure Factors (2631 Kb)
  • Retrieve 4B80 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4B80 from S2C, [Save to disk]
  • Re-refined 4b80 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4B80 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4B80
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4B80, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4b80_A] [4b80_B] [4b80]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4B80
  • Community annotation for 4B80 at PDBWiki (http://pdbwiki.org)

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