4BDK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, NO3, RQQ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFragment-Based Screening Maps Inhibitor Interactions in the ATP-Binding Site of Checkpoint Kinase 2., Silva-Santisteban MC, Westwood IM, Boxall K, Brown N, Peacock S, McAndrew C, Barrie E, Richards M, Mirza A, Oliver AW, Burke R, Hoelder S, Jones K, Aherne GW, Blagg J, Collins I, Garrett MD, van Montfort RL, PLoS One. 2013 Jun 12;8(6):e65689. doi: 10.1371/journal.pone.0065689. Print 2013. PMID:23776527
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (4bdk.pdb1.gz) 183 Kb
  • LPC: Ligand-Protein Contacts for 4BDK
  • CSU: Contacts of Structural Units for 4BDK
  • Structure Factors (270 Kb)
  • Retrieve 4BDK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BDK from S2C, [Save to disk]
  • Re-refined 4bdk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BDK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bdk] [4bdk_A]
  • SWISS-PROT database:
  • Domain found in 4BDK: [S_TKc ] by SMART

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