4BDQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GLU, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCorrelating efficacy and desensitization with GluK2 ligand-binding domain movements., Nayeem N, Mayans O, Green T, Open Biol. 2013 May 29;3(5):130051. doi: 10.1098/rsob.130051. PMID:23720540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk]
  • Biological Unit Coordinates (4bdq.pdb1.gz) 170 Kb
  • LPC: Ligand-Protein Contacts for 4BDQ
  • CSU: Contacts of Structural Units for 4BDQ
  • Structure Factors (375 Kb)
  • Retrieve 4BDQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BDQ from S2C, [Save to disk]
  • Re-refined 4bdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BDQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bdq] [4bdq_A] [4bdq_B]
  • SWISS-PROT database:
  • Domains found in 4BDQ: [Lig_chan-Glu_bd] [PBPb] [PBPe ] by SMART

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