4BGC Transport Protein date Mar 25, 2013
title T1 Domain Of The Renal Potassium Channel Kv1.3
authors M.Weyand, W.Kremer, H.R.Kalbitzer
compound source
Molecule: Potassium Voltage-Gated Channel Subfamily A Membe
Chain: A
Fragment: T1 Domain, Residues 104-204
Synonym: Hgk5, Hlk3, Hpcn3, Voltage-Gated K(+) Channel Huki Voltage-Gated Potassium Channel Subunit Kv1.3;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Rosetta Plyss
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet20d
Expression_system_plasmid: Plyssrare
Other_details: German Resource Center For Genome Research (
symmetry Space Group: I 4
R_factor 0.163 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.740 59.740 62.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand CSO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference1.2 A X-ray Structure of the Renal Potassium Channel K1.3 T1 Domain., Kremer W, Weyand M, Winklmeier A, Schreier C, Kalbitzer HR, Protein J. 2013 Oct 11. PMID:24114469
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4bgc.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 4BGC
  • CSU: Contacts of Structural Units for 4BGC
  • Structure Factors (253 Kb)
  • Retrieve 4BGC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BGC from S2C, [Save to disk]
  • Re-refined 4bgc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BGC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BGC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BGC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bgc_A] [4bgc]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BGC: [BTB ] by SMART
  • Other resources with information on 4BGC
  • Community annotation for 4BGC at PDBWiki (http://pdbwiki.org)

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