4BKX Transcription date Apr 30, 2013
title The Structure Of Hdac1 In Complex With The Dimeric Elm2-Sant Of Mta1 From The Nurd Complex
authors C.J.Millard, P.J.Watson, I.Celardo, Y.Gordiyenko, S.M.Cowley, C.V.Robinson, L.Fairall, J.W.R.Schwabe
compound source
Molecule: Metastasis-Associated Protein Mta1
Chain: A
Fragment: Elm2-Sant
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293f
Expression_system_vector: Pcdna3

Molecule: Histone Deacetylase 1
Chain: B
Synonym: Hd1
Ec: 3.5.1.98
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293f
Expression_system_vector: Pcdna3
symmetry Space Group: P 32 2 1
R_factor 0.21084 R_Free 0.26149
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.199 108.199 133.164 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand ACT, K, SO4, ZN enzyme Hydrolase E.C.3.5.1.98 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • histone deacetylase activity...


  • Primary referenceClass I HDACs Share a Common Mechanism of Regulation by Inositol Phosphates., Millard CJ, Watson PJ, Celardo I, Gordiyenko Y, Cowley SM, Robinson CV, Fairall L, Schwabe JW, Mol Cell. 2013 Jun 19. pii: S1097-2765(13)00407-3. doi:, 10.1016/j.molcel.2013.05.020. PMID:23791785
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (4bkx.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 4BKX
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  • Re-refined 4bkx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • 3D motif for 4BKX, from MSDmotif at EBI
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  • Domain organization of by SWISSPFAM
  • Domains found in 4BKX: [ELM2] [SANT ] by SMART
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