4BKZ Transferase date Apr 30, 2013
title Crystal Structure Of Unphosphorylated Maternal Embryonic Leu Zipper Kinase (Melk) In Complex With A Benzodipyrazole Inhi
authors G.Canevari, S.Re Depaolini, U.Cucchi, B.Forte, P.Carpinelli, J.A.
compound source
Molecule: Maternal Embryonic Leucine Zipper Kinase
Chain: A
Fragment: Kinase And Uba Domains, Residues 2-340
Synonym: Hmelk, Protein Kinase Eg3, Peg3 Kinase, Protein Ki Hpk38, Tyrosine-Protein Kinase Melk;
Ec: 2.7.11.1, 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf21
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.199 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.440 63.150 95.310 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 1WS enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insight into Maternal Embryonic Leucine zipper Kinase (MELK) conformation and inhibition towards structure-based drug design., Canevari G, Re Depaolini S, Cucchi U, Bertrand JA, Casale E, Perrera C, Forte B, Carpinelli P, Felder ER, Biochemistry. 2013 Aug 5. PMID:23914841
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4bkz.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4BKZ
  • CSU: Contacts of Structural Units for 4BKZ
  • Structure Factors (263 Kb)
  • Retrieve 4BKZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BKZ from S2C, [Save to disk]
  • Re-refined 4bkz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BKZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BKZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BKZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bkz] [4bkz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BKZ: [S_TKc ] by SMART
  • Other resources with information on 4BKZ
  • Community annotation for 4BKZ at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science