4BLO	Hydrolase	date	May 04, 2013
title	P4 Protein From Bacteriophage Phi6 In Complex With Adp
authors	K.El Omari, C.Meier, D.Kainov, G.Sutton, J.M.Grimes, M.M.Poranen, D.H.Bamford, R.Tuma, D.I.Stuart, E.J.Mancini
compound		source
Molecule: Packaging Enzyme P4 Chain: A, B, C, D, E, F, G, H, I, J, K, L Fragment: Residues 1-309 Ec: 3.6.1.15 Engineered: Yes		Organism_scientific: Pseudomonas Phage Phi6 Organism_common: Bacteriophage Phi6 Organism_taxid: 10879 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.2170 R_Free 0.2441
crystal cell	length a length b length c angle alpha angle beta angle gamma 93.840 95.260 98.330 82.46 86.17 64.85
method	X-Ray Diffraction	resolution	2.80 Å
ligand	ADP, CA	enzyme	Hydrolase E.C.3.6.1.15 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Tracking in atomic detail the functional specializations in viral RecA helicases that occur during evolution., El Omari K, Meier C, Kainov D, Sutton G, Grimes JM, Poranen MM, Bamford DH, Tuma R, Stuart DI, Mancini EJ, Nucleic Acids Res. 2013 Aug 11. PMID:23939620

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1048 Kb) [Save to disk] Biological Unit Coordinates (4blo.pdb1.gz) 521 Kb Biological Unit Coordinates (4blo.pdb2.gz) 523 Kb LPC: Ligand-Protein Contacts for 4BLO CSU: Contacts of Structural Units for 4BLO Structure Factors (868 Kb) Retrieve 4BLO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BLO from S2C, [Save to disk] Re-refined 4blo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BLO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BLO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BLO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4blo_C] [4blo_H] [4blo_J] [4blo_G] [4blo_K] [4blo_B] [4blo_D] [4blo] [4blo_I] [4blo_E] [4blo_F] [4blo_A] [4blo_L] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4BLO

Community annotation for 4BLO at PDBWiki (http://pdbwiki.org)

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