4BR0	Hydrolase	date	Jun 03, 2013
title	Rat Ntpdase2 In Complex With Ca Ampnp
authors	M.Zebisch, P.Schaefer, P.Lauble, N.Straeter
compound		source
Molecule: Ectonucleoside Triphosphate Diphosphohydrolase 2 Chain: A Fragment: Residues 28-462 Synonym: Ntpdase 2, Cd39 Antigen-Like 1, Ecto-Atp Diphosphohydrolase 2, Ecto-Atpdase 2, Ecto-Atpase 2, Ntpda Ec: 3.6.1.-, 3.6.1.5 Engineered: Yes		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.16904 R_Free 0.21847
crystal cell	length a length b length c angle alpha angle beta angle gamma 41.170 69.130 164.510 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.05 Å
ligand	AU1, CA, GOL	enzyme	Hydrolase E.C.3.6.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystallographic Snapshots along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases., Zebisch M, Krauss M, Schafer P, Lauble P, Strater N, Structure. 2013 Jul 2. pii: S0969-2126(13)00200-1. doi:, 10.1016/j.str.2013.05.016. PMID:23830739

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk] Biological Unit Coordinates (4br0.pdb1.gz) 142 Kb LPC: Ligand-Protein Contacts for 4BR0 CSU: Contacts of Structural Units for 4BR0 Structure Factors (414 Kb) Retrieve 4BR0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BR0 from S2C, [Save to disk] Re-refined 4br0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BR0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4BR0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4BR0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4br0] [4br0_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4BR0

Community annotation for 4BR0 at PDBWiki (http://pdbwiki.org)

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