4BS5 MOUSE CATHEPSIN S WITH COVALENT LIGAND date
authors Banner, D.W., Benz, J., Gsell, B., Stihle, M., Ruf, A., Haap, W.
compound source
symmetry
R_factor
R_Free 0.22694
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.25
ligand MG2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIdentification of Potent and Selective Cathepsin S Inhibitors Containing Different Central Cyclic Scaffolds., Hilpert H, Mauser H, Humm R, Anselm L, Kuehne H, Hartmann G, Gruener S, Banner DW, Benz J, Gsell B, Kuglstatter A, Stihle M, Thoma R, Sanchez RA, Iding H, Wirz B, Haap W, J Med Chem. 2013 Nov 22. PMID:24224654
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (4bs5.pdb1.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 4BS5
  • CSU: Contacts of Structural Units for 4BS5
  • Structure Factors (1246 Kb)
  • Retrieve 4BS5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BS5 from S2C, [Save to disk]
  • Re-refined 4bs5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BS5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BS5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BS5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bs5_A] [4bs5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BS5: [Pept_C1 ] by SMART
  • Other resources with information on 4BS5
  • Community annotation for 4BS5 at PDBWiki (http://pdbwiki.org)

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