4BUJ Crystal structure of the S. cerevisiae Ski2-3-8 complex date
authors Halbach, F., Reichelt, P., Rode, M., Conti, E.
compound source
symmetry
R_factor
R_Free 0.2649
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.70
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E


F, B


H, C, D, G


Primary referenceThe yeast ski complex: crystal structure and RNA channeling to the exosome complex., Halbach F, Reichelt P, Rode M, Conti E, Cell. 2013 Aug 15;154(4):814-26. doi: 10.1016/j.cell.2013.07.017. PMID:23953113
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1878 Kb) [Save to disk]
  • Biological Unit Coordinates (4buj.pdb1.gz) 960 Kb
  • Biological Unit Coordinates (4buj.pdb2.gz) 907 Kb
  • LPC: Ligand-Protein Contacts for 4BUJ
  • CSU: Contacts of Structural Units for 4BUJ
  • Structure Factors (660 Kb)
  • Retrieve 4BUJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BUJ from S2C, [Save to disk]
  • Re-refined 4buj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4BUJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4BUJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BUJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4buj] [4buj_B] [4buj_H] [4buj_D] [4buj_E] [4buj_A] [4buj_C] [4buj_G] [4buj_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4BUJ: [DEXDc] [DSHCT] [HELICc] [TPR] [WD40 ] by SMART
    • Other resources with information on 4BUJ
  • Community annotation for 4BUJ at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science