4BV5 Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV. date
authors Sandmark, J., Althage, M., Andersson, G.M.K., Antonsson, T., Blaho, S., Bodin, C., Bostrom, J., Chen, Y., Dahlen, A., Eriksson, P.O., Evertsson, E., Fex, T., Fjellstrom, O., Gustafsson, D., Hallberg, C., Hicks, R., Jarkvist, E., Johansson, C., Kalies, I., Kang, D., Karlsson, B.Svalstedt., Kartberg, F., Legnehed, A., Lindqvist, A.M., Martinsson, S.A., Moberg, A., Petersson, A.U., Ridderstrom, M., Thelin, A., Tigerstrom, A., Vinblad, J., Xu, B., Knecht, W.
compound source
symmetry
R_factor
R_Free 0.23013
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand 5C3 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (4bv5.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (4bv5.pdb2.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 4BV5
  • CSU: Contacts of Structural Units for 4BV5
  • Structure Factors (101 Kb)
  • Retrieve 4BV5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BV5 from S2C, [Save to disk]
  • Re-refined 4bv5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BV5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BV5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BV5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bv5_A] [4bv5_B] [4bv5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4BV5: [KR ] by SMART
  • Other resources with information on 4BV5
  • Community annotation for 4BV5 at PDBWiki (http://pdbwiki.org)

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