4BX9	Protein Transport	date	Jul 09, 2013
title	Human Vps33a In Complex With A Fragment Of Human Vps16
authors	S.C.Graham, L.Wartosch, S.R.Gray, E.J.Scourfield, J.E.Deane, J.P. D.J.Owen
compound		source
Molecule: Vacuolar Protein Sorting-Associated Protein 33a Chain: A, B Synonym: Hvps33a, Vps33a Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Popt
Molecule: Vacuolar Protein Sorting-Associated Protein 16 Ho Chain: C Fragment: Residues 642-736 Synonym: Hvps16, Vps16 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Popt3g
symmetry	Space Group: P 43 21 2	R_factor 0.176 R_Free 0.210
crystal cell	length a length b length c angle alpha angle beta angle gamma 128.410 128.410 263.360 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	FMT, LMR, MLA	enzyme
Gene Ontology	Chain Function Process Component A, B C
Primary reference	Structural basis of Vps33A recruitment to the human HOPS complex by Vps16., Graham SC, Wartosch L, Gray SR, Scourfield EJ, Deane JE, Luzio JP, Owen DJ, Proc Natl Acad Sci U S A. 2013 Jul 30. PMID:23901104

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (436 Kb) [Save to disk] Biological Unit Coordinates (4bx9.pdb1.gz) 230 Kb Biological Unit Coordinates (4bx9.pdb2.gz) 203 Kb LPC: Ligand-Protein Contacts for 4BX9 CSU: Contacts of Structural Units for 4BX9 Structure Factors (925 Kb) Retrieve 4BX9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4BX9 from S2C, [Save to disk] Re-refined 4bx9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4BX9 in 3D

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Visual 3D analysis of 4BX9

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4BX9, from MSDmotif at EBI Fold representative 4bx9 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4bx9] [4bx9_B] [4bx9_A] [4bx9_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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