4C2T Crystal structure of full length Deinococcus radiodurans UvrD in complex with DNA date
authors Stelter, M., Acajjaoui, S., McSweeney, S., Timmins, J.
compound source
symmetry
R_factor
R_Free 0.2713
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.00
ligand ANP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • DNA helicase activity
  • 3'-5' DNA helicase activity


    • Primary referenceStructural and Mechanistic Insight into DNA Unwinding by Deinococcus radiodurans UvrD., Stelter M, Acajjaoui S, McSweeney S, Timmins J, PLoS One. 2013 Oct 15;8(10):e77364. doi: 10.1371/journal.pone.0077364. PMID:24143224
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (939 Kb) [Save to disk]
  • Biological Unit Coordinates (4c2t.pdb1.gz) 464 Kb
  • Biological Unit Coordinates (4c2t.pdb2.gz) 469 Kb
  • LPC: Ligand-Protein Contacts for 4C2T
  • CSU: Contacts of Structural Units for 4C2T
  • Structure Factors (1726 Kb)
  • Retrieve 4C2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C2T from S2C, [Save to disk]
  • Re-refined 4c2t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4C2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4C2T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4C2T, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c2t_N] [4c2t_P] [4c2t_M] [4c2t_A] [4c2t_B] [4c2t] [4c2t_O] [4c2t_C] [4c2t_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4C2T
  • Community annotation for 4C2T at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science