4C3P Transferase date Aug 26, 2013
title Structure Of Dephosphorylated Aurora A (122-403) Bound To Tp Amppcp
authors A.Zorba, S.Kutter, D.Kern
compound source
Molecule: Aurora Kinase A
Chain: A, D
Fragment: Kinase Domain, Residues 121-403
Synonym: Aurora 2, Auroraipl1-Related Kinase 1, Ark-1, Aur Ed Kinase 1, Hark1, Breast Tumor-Amplified Kinase, Serinet Protein Kinase 15, Serinethreonine-Protein Kinase 6, Serin Eonine-Protein Kinase Aurora-A, Aurora A Kinase;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a

Molecule: Targeting Protein For Xklp2
Chain: B, E
Fragment: Aurora A Kinase Binding Domain, Residues 1-43
Synonym: Differentially Expressed In Cancerous And Non-Canc G Cells 2, Dil-2, Hepatocellular Carcinoma-Associated Antig Protein Fls353, Restricted Expression Proliferation-Associa Otein 100, P100, Targeting Protein For Xklp2, Tpx2;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 21 21 21
R_factor 0.201 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.927 86.717 153.546 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.69 Å
ligand ACP, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D


Primary referenceMolecular mechanism of Aurora A kinase autophosphorylation and its allosteric activation by TPX2., Zorba A, Buosi V, Kutter S, Kern N, Pontiggia F, Cho YJ, Kern D, Elife. 2014 May 27;3:e02667. doi: 10.7554/eLife.02667. PMID:24867643
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4c3p.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4C3P
  • CSU: Contacts of Structural Units for 4C3P
  • Structure Factors (256 Kb)
  • Retrieve 4C3P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4C3P from S2C, [Save to disk]
  • Re-refined 4c3p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4C3P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4C3P
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4C3P, from MSDmotif at EBI
  • Fold representative 4c3p from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4c3p] [4c3p_E] [4c3p_B] [4c3p_D] [4c3p_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4C3P: [S_TKc ] by SMART
  • Other resources with information on 4C3P
  • Community annotation for 4C3P at PDBWiki (http://pdbwiki.org)

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