4CA9 Isomerase date Oct 07, 2013
title Structure Of The Nucleoplasmin-Like N-Terminal Domain Of Dro Fkbp39
authors J.Artero, T.Forsyth, P.Callow, A.A.Watson, W.Zhang, E.D.Laue, C.Ed Muth, M.Przewloka
compound source
Molecule: 39 Kda Fk506-Binding Nuclear Protein
Chain: A, B, C, D, E
Fragment: Nucleoplasmin-Like, Residues 3-92
Synonym: Peptidyl-Prolyl Cis-Trans Isomerase, Ppiase, Rotam Dm_fkbp39;
Engineered: Yes
Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
methodSolution NMR
enzyme Isomerase E.C. BRENDA
Primary referenceThe Pentameric Nucleoplasmin Fold Is Present in Drosophila FKBP39 and a Large Number of Chromatin-Related Proteins., Edlich-Muth C, Artero JB, Callow P, Przewloka MR, Watson AA, Zhang W, Glover DM, Debski J, Dadlez M, Round AR, Forsyth VT, Laue ED, J Mol Biol. 2015 Mar 24. pii: S0022-2836(15)00194-1. doi:, 10.1016/j.jmb.2015.03.010. PMID:25813344
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2560 Kb) [Save to disk]
  • Biological Unit Coordinates (4ca9.pdb1.gz) 130 Kb
  • CSU: Contacts of Structural Units for 4CA9
  • Original NMR restraints for 4CA9 from PDB
  • Retrieve 4CA9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CA9 from S2C, [Save to disk]
  • View 4CA9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CA9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4CA9, from MSDmotif at EBI
  • Fold representative 4ca9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ca9_A] [4ca9_B] [4ca9_E] [4ca9] [4ca9_C] [4ca9_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4CA9
  • Community annotation for 4CA9 at PDBWiki (http://pdbwiki.org)

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