4CBA Apoptosis date Oct 10, 2013
title Structural Of Delta 1-76 Ctnnbl1 In Space Group I222
authors K.Ganesh, F.Vanmaldegem, S.B.Telerman, P.Simpson, C.M.Johnson, R.L.Williams, M.S.Neuberger, C.Rada
compound source
Molecule: Beta-Catenin-Like Protein 1
Chain: A
Fragment: Residues 77-563
Synonym: Nuclear-Associated Protein, Nap, Testis Developmen Nyd-Sp19, Ctnnbl1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Popth
symmetry Space Group: I 2 2 2
R_factor 0.216 R_Free 0.278
length a length b length c angle alpha angle beta angle gamma
87.422 92.848 194.949 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.10 Å
ligand EDO, SO4 enzyme
Primary referenceStructural and mutational analysis reveals that CTNNBL1 binds NLSs in a manner distinct from that of its closest armadillo-relative, karyopherin alpha, Ganesh K, van Maldegem F, Telerman SB, Simpson P, Johnson CM, Williams RL, Neuberger MS, Rada C, FEBS Lett. 2013 Nov 20. pii: S0014-5793(13)00847-8. doi:, 10.1016/j.febslet.2013.11.013. PMID:24269683
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (4cba.pdb1.gz) 315 Kb
  • LPC: Ligand-Protein Contacts for 4CBA
  • CSU: Contacts of Structural Units for 4CBA
  • Structure Factors (337 Kb)
  • Retrieve 4CBA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CBA from S2C, [Save to disk]
  • Re-refined 4cba structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CBA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CBA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4CBA, from MSDmotif at EBI
  • Fold representative 4cba from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cba_A] [4cba]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4CBA: [DUF1716 ] by SMART
  • Other resources with information on 4CBA
  • Community annotation for 4CBA at PDBWiki (http://pdbwiki.org)

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