4CCH Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in an open binary complex with d5SICS as templating nucleotide date
authors Betz, K., Malyshev, D.A., Lavergne, T., Welte, W., Diederichs, K., Romesberg, F.E., Marx, A.
compound source
symmetry
R_factor
R_Free 0.2608
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.55
ligand DOC, FMT, GOL, LHO, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Insights into DNA Replication without Hydrogen Bonds., Betz K, Malyshev DA, Lavergne T, Welte W, Diederichs K, Romesberg FE, Marx A, J Am Chem Soc. 2013 Nov 27. PMID:24283923
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (298 Kb) [Save to disk]
  • Biological Unit Coordinates (4cch.pdb1.gz) 291 Kb
  • LPC: Ligand-Protein Contacts for 4CCH
  • CSU: Contacts of Structural Units for 4CCH
  • Structure Factors (330 Kb)
  • Retrieve 4CCH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CCH from S2C, [Save to disk]
  • Re-refined 4cch structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CCH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CCH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CCH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cch] [4cch_B] [4cch_A] [4cch_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4CCH: [POLAc ] by SMART
  • Other resources with information on 4CCH
  • Community annotation for 4CCH at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science