4CDR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACE, NH2, SO4, SRZ, UDP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, A, D


Primary referenceBisubstrate UDP-peptide conjugates as human O-GlcNAc transferase inhibitors., Borodkin VS, Schimpl M, Gundogdu M, Rafie K, Dorfmueller HC, Robinson DA, van Aalten DM, Biochem J. 2013 Nov 21. PMID:24256146
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (450 Kb) [Save to disk]
  • Biological Unit Coordinates (4cdr.pdb1.gz) 116 Kb
  • Biological Unit Coordinates (4cdr.pdb2.gz) 115 Kb
  • Biological Unit Coordinates (4cdr.pdb3.gz) 115 Kb
  • Biological Unit Coordinates (4cdr.pdb4.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 4CDR
  • CSU: Contacts of Structural Units for 4CDR
  • Structure Factors (2018 Kb)
  • Retrieve 4CDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CDR from S2C, [Save to disk]
  • Re-refined 4cdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cdr] [4cdr_A] [4cdr_B] [4cdr_C] [4cdr_D] [4cdr_E] [4cdr_F] [4cdr_G] [4cdr_H]
  • SWISS-PROT database:
  • Domain found in 4CDR: [TPR ] by SMART

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