4CFQ Ca-bound truncated (delta13C) and C3S, C81S and C86S mutated S100A4 complexed with non-muscle myosin IIA date
authors Duelli, A., Kiss, B., Lundholm, I., Bodor, A., Radnai, L., Petoukhov, M., Svergun, D., Nyitray, L., Katona, G.
compound source
symmetry
R_factor
R_Free 0.1928
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.37
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe C-Terminal Random Coil Region Tunes the Ca2+-Binding Affinity of S100A4 through Conformational Activation., Duelli A, Kiss B, Lundholm I, Bodor A, Petoukhov MV, Svergun DI, Nyitray L, Katona G, PLoS One. 2014 May 15;9(5):e97654. doi: 10.1371/journal.pone.0097654. eCollection, 2014. PMID:24830809
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (206 Kb) [Save to disk]
  • Biological Unit Coordinates (4cfq.pdb1.gz) 101 Kb
  • Biological Unit Coordinates (4cfq.pdb2.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 4CFQ
  • CSU: Contacts of Structural Units for 4CFQ
  • Structure Factors (719 Kb)
  • Retrieve 4CFQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CFQ from S2C, [Save to disk]
  • Re-refined 4cfq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CFQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CFQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CFQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cfq_B] [4cfq] [4cfq_Q] [4cfq_D] [4cfq_R] [4cfq_A] [4cfq_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4CFQ: [S_100 ] by SMART
  • Other resources with information on 4CFQ
  • Community annotation for 4CFQ at PDBWiki (http://pdbwiki.org)

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