4CG4 Crystal structure of the CHS-B30.2 domains of TRIM20 date
authors Weinert, C., Morger, D., Djekic, A., Mittl, P.R.E., Gruetter, M.G.
compound source
symmetry
R_factor
R_Free 0.2607
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand ACE, DHL, EDO, SO4 enzyme
Primary referenceCrystal structure of TRIM20 C-terminal coiled-coil/B30.2 fragment: implications for the recognition of higher order oligomers., Weinert C, Morger D, Djekic A, Grutter MG, Mittl PR, Sci Rep. 2015 Jun 4;5:10819. doi: 10.1038/srep10819. PMID:26043233
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1095 Kb) [Save to disk]
  • Biological Unit Coordinates (4cg4.pdb1.gz) 361 Kb
  • Biological Unit Coordinates (4cg4.pdb2.gz) 369 Kb
  • Biological Unit Coordinates (4cg4.pdb3.gz) 368 Kb
  • LPC: Ligand-Protein Contacts for 4CG4
  • CSU: Contacts of Structural Units for 4CG4
  • Structure Factors (1142 Kb)
  • Retrieve 4CG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CG4 from S2C, [Save to disk]
  • Re-refined 4cg4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CG4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CG4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cg4_B] [4cg4_E] [4cg4] [4cg4_C] [4cg4_F] [4cg4_A] [4cg4_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4CG4: [PRY] [SPRY ] by SMART
    • Other resources with information on 4CG4
  • Community annotation for 4CG4 at PDBWiki (http://pdbwiki.org)

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