4CGX Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 1) date
authors Guilligay, D., Kadlec, J., Crepin, T., Lunardi, T., Bouvier, D., Kochs, G., Ruigrok, R.W.H., Cusack, S.
compound source
symmetry
R_factor
R_Free 0.2797
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand MSE enzyme
Primary referenceComparative structural and functional analysis of orthomyxovirus polymerase cap-snatching domains., Guilligay D, Kadlec J, Crepin T, Lunardi T, Bouvier D, Kochs G, Ruigrok RW, Cusack S, PLoS One. 2014 Jan 15;9(1):e84973. doi: 10.1371/journal.pone.0084973. eCollection, 2014 Jan 15. PMID:24454773
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (4cgx.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 4CGX
  • CSU: Contacts of Structural Units for 4CGX
  • Structure Factors (106 Kb)
  • Retrieve 4CGX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CGX from S2C, [Save to disk]
  • Re-refined 4cgx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CGX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CGX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CGX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cgx_B] [4cgx_A] [4cgx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4CGX
  • Community annotation for 4CGX at PDBWiki (http://pdbwiki.org)

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