4CIM Complex of a Bcl-w BH3 mutant with a BH3 domain date
authors Colman, P.M., Lee, E.F., Fairlie, W.D.
compound source
symmetry
R_factor
R_Free 0.2096
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Functional Differences of Pro-survival and Pro-apoptotic B cell lymphoma 2 (Bcl-2) Proteins Depend on Structural Differences in their Bcl-2 Homology 3 (BH3) Domains., Lee EF, Dewson G, Evangelista M, Pettikiriarachchi A, Zhu H, Colman PM, Fairlie WD, J Biol Chem. 2014 Nov 3. pii: jbc.M114.610758. PMID:25371206
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (4cim.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (4cim.pdb2.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 4CIM
  • CSU: Contacts of Structural Units for 4CIM
  • Structure Factors (468 Kb)
  • Retrieve 4CIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CIM from S2C, [Save to disk]
  • Re-refined 4cim structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CIM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CIM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cim_A] [4cim_P] [4cim_B] [4cim] [4cim_Q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4CIM: [BCL] [BH4 ] by SMART
  • Other resources with information on 4CIM
  • Community annotation for 4CIM at PDBWiki (http://pdbwiki.org)

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