4CL3 1.70 A resolution structure of the malate dehydrogenase from Chloroflexus aurantiacus date
authors Talon, R., Madern, D., Girard, E.
compound source
symmetry
R_factor
R_Free 0.2086
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand ACT, CD, CL, PEG enzyme
note 4CL3 supersedes 4BGT
Gene
Ontology
ChainFunctionProcessComponent
A, D


Primary referenceAn experimental point of view on hydration/solvation in halophilic proteins., Talon R, Coquelle N, Madern D, Girard E, Front Microbiol. 2014 Feb 21;5:66. doi: 10.3389/fmicb.2014.00066. eCollection, 2014. PMID:24600446
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]
  • Biological Unit Coordinates (4cl3.pdb1.gz) 424 Kb
  • Biological Unit Coordinates (4cl3.pdb2.gz) 215 Kb
  • LPC: Ligand-Protein Contacts for 4CL3
  • CSU: Contacts of Structural Units for 4CL3
  • Structure Factors (713 Kb)
  • Retrieve 4CL3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CL3 from S2C, [Save to disk]
  • Re-refined 4cl3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4CL3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CL3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CL3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cl3] [4cl3_D] [4cl3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CL3
  • Community annotation for 4CL3 at PDBWiki (http://pdbwiki.org)

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