4CMS Hydrolase (Acid Proteinase) date Nov 01, 1991
title X-Ray Analyses Of Aspartic Proteinases Iv. Structure And Ref 2.2 Angstroms Resolution Of Bovine Chymosin
authors M.Newman, C.Frazao, G.Khan, I.J.Tickle, T.L.Blundell, M.Safro, N.A A.Zdanov
compound source
Molecule: Chymosin B
Chain: A
Ec: 3.4.23.4
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: I 2 2 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.980 114.120 72.760 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Hydrolase E.C.3.4.23.4 BRENDA
note 4CMS (Molecule of the Month:pdb12)
related structures by homologous chain: 1CMS, 3CMS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray analyses of aspartic proteinases. IV. Structure and refinement at 2.2 A resolution of bovine chymosin., Newman M, Safro M, Frazao C, Khan G, Zdanov A, Tickle IJ, Blundell TL, Andreeva N, J Mol Biol 1991 Oct 20;221(4):1295-309. PMID:1942052
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (4cms.pdb1.gz) 51 Kb
  • CSU: Contacts of Structural Units for 4CMS
  • Likely Quarternary Molecular Structure file(s) for 4CMS
  • Retrieve 4CMS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CMS from S2C, [Save to disk]
  • View 4CMS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CMS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CMS, from MSDmotif at EBI
  • Genome occurence of 4CMS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4cms__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cms] [4cms_A]
  • SWISS-PROT database: [P00794]
  • Domain organization of [CHYM_BOVIN] by SWISSPFAM
  • Other resources with information on 4CMS
  • Community annotation for 4CMS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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