4CQO Structure of the human CNOT1 superfamily homology domain in complex with a Nanos1 peptide date
authors Raisch, T., Jonas, S., Weichenrieder, O., Bhandari, D., Izaurralde, E.
compound source
symmetry
R_factor
R_Free 0.2427
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceStructural basis for the Nanos-mediated recruitment of the CCR4-NOT complex and translational repression., Bhandari D, Raisch T, Weichenrieder O, Jonas S, Izaurralde E, Genes Dev. 2014 Apr 15;28(8):888-901. doi: 10.1101/gad.237289.113. PMID:24736845
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (369 Kb) [Save to disk]
  • Biological Unit Coordinates (4cqo.pdb1.gz) 182 Kb
  • Biological Unit Coordinates (4cqo.pdb2.gz) 183 Kb
  • CSU: Contacts of Structural Units for 4CQO
  • Structure Factors (393 Kb)
  • Retrieve 4CQO in mmCIF format [Save to disk]
  • Re-refined 4cqo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4CQO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4CQO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4CQO, from MSDmotif at EBI
  • Fold representative 4cqo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4cqo] [4cqo_A] [4cqo_C] [4cqo_B] [4cqo_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4CQO
  • Community annotation for 4CQO at PDBWiki (http://pdbwiki.org)

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