4CRP Solution structure of a TrkAIg2 domain construct for use in drug discovery date
authors Shoemark, D.K., Fahey, M., Williams, C., Sessions, R.B., Crump, M.P., Allen-Birt, S.J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceDesign and Nuclear Magnetic Resonance (NMR) Structure Determination of the Second Extracellular Immunoglobulin Tyrosine Kinase A (TrkAIg2) Domain Construct for Binding Site Elucidation in Drug Discovery., Shoemark DK, Williams C, Fahey MS, Watson JJ, Tyler SJ, Scoltock SJ, Ellis RZ, Wickenden E, Burton AJ, Hemmings JL, Bailey CD, Dawbarn D, Jane DE, Willis CL, Sessions RB, Allen SJ, Crump MP, J Med Chem. 2014 Dec 22. PMID:25454499
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (723 Kb) [Save to disk]
  • Biological Unit Coordinates (4crp.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 4CRP
  • Original NMR restraints for 4CRP from PDB
  • Retrieve 4CRP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4CRP from S2C, [Save to disk]
    • View 4CRP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4CRP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4CRP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4crp] [4crp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4CRP
  • Community annotation for 4CRP at PDBWiki (http://pdbwiki.org)

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