4D69 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand A2G, MN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, F, B, E, A, G, J, C, I, K, L, D


Primary referenceDetection of Tumor-Associated Glycopeptides by Lectins: The Peptide Context Modulates Carbohydrate Recognition., Madariaga D, Martinez-Saez N, Somovilla VJ, Coelho H, Valero-Gonzalez J, Castro-Lopez J, Asensio JL, Jimenez-Barbero J, Busto JH, Avenoza A, Marcelo F, Hurtado-Guerrero R, Corzana F, Peregrina JM, ACS Chem Biol. 2014 Dec 10. PMID:25457745
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (910 Kb) [Save to disk]
  • Biological Unit Coordinates (4d69.pdb1.gz) 82 Kb
  • Biological Unit Coordinates (4d69.pdb2.gz) 84 Kb
  • Biological Unit Coordinates (4d69.pdb3.gz) 84 Kb
  • Biological Unit Coordinates (4d69.pdb4.gz) 82 Kb
  • Biological Unit Coordinates (4d69.pdb5.gz) 81 Kb
  • Biological Unit Coordinates (4d69.pdb6.gz) 81 Kb
  • Biological Unit Coordinates (4d69.pdb7.gz) 81 Kb
  • Biological Unit Coordinates (4d69.pdb8.gz) 82 Kb
  • Biological Unit Coordinates (4d69.pdb9.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 4D69
  • CSU: Contacts of Structural Units for 4D69
  • Structure Factors (4552 Kb)
  • Retrieve 4D69 in mmCIF format [Save to disk]
  • Re-refined 4d69 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4D69 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d69] [4d69_A] [4d69_B] [4d69_C] [4d69_D] [4d69_E] [4d69_F] [4d69_G] [4d69_H] [4d69_I] [4d69_J] [4d69_K] [4d69_L] [4d69_O] [4d69_P] [4d69_Q] [4d69_R] [4d69_S] [4d69_T] [4d69_U] [4d69_V] [4d69_W] [4d69_X] [4d69_Y] [4d69_Z]
  • SWISS-PROT database:

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