4D9M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 0JO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of Escherichia coli Diaminopropionate Ammonia-lyase Reveals Mechanism of Enzyme Activation and Catalysis., Bisht S, Rajaram V, Bharath SR, Kalyani JN, Khan F, Rao AN, Savithri HS, Murthy MR, J Biol Chem. 2012 Jun 8;287(24):20369-81. Epub 2012 Apr 13. PMID:22505717
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (4d9m.pdb1.gz) 230 Kb
  • LPC: Ligand-Protein Contacts for 4D9M
  • CSU: Contacts of Structural Units for 4D9M
  • Structure Factors (388 Kb)
  • Retrieve 4D9M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4D9M from S2C, [Save to disk]
  • Re-refined 4d9m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4D9M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4d9m] [4d9m_A] [4d9m_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science