4DAY	Protein Binding Hydrolase	date	Jan 13, 2012
title	Crystal Structure Of The Rmi Core Complex With Mm2 Peptide F
authors	K.A.Hoadley, J.L.Keck
compound		source
Molecule: Recq-Mediated Genome Instability Protein 1 Chain: A Fragment: C-Terminal Ob Domain (Residues 473-625) Synonym: Blm-Associated Protein Of 75 Kda, Blap75, Faap75 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rmi1, C9orf76 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Recq-Mediated Genome Instability Protein 2 Chain: B Synonym: Hrmi2, Blm-Associated Protein Of 18 Kda, Blap18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rmi2, C16orf75 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Fanconi Anemia Group M Protein Chain: C Fragment: Mm2 Peptide (Residues 1218-1251) Synonym: Protein Facm, Atp-Dependent Rna Helicase Fancm, Fa Anemia-Associated Polypeptide Of 250 Kda, Faap250, Protein Ortholog; Ec: 3.6.4.13 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fancm, Kiaa1596 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: I 21 21 21	R_factor 0.217 R_Free 0.325
crystal cell	length a length b length c angle alpha angle beta angle gamma 75.312 96.440 99.025 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.30 Å
ligand		enzyme	Hydrolase E.C.3.6.4.13 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Defining the molecular interface that connects the Fanconi anemia protein FANCM to the Bloom syndrome dissolvasome., Hoadley KA, Xue Y, Ling C, Takata M, Wang W, Keck JL, Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4437-42. Epub 2012 Mar 5. PMID:22392978

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk] Biological Unit Coordinates (4day.pdb1.gz) 90 Kb CSU: Contacts of Structural Units for 4DAY Structure Factors (88 Kb) Retrieve 4DAY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DAY from S2C, [Save to disk] Re-refined 4day structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DAY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4DAY

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4DAY, from MSDmotif at EBI Fold representative 4day from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4day_B] [4day_A] [4day] [4day_C] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4DAY

Community annotation for 4DAY at PDBWiki (http://pdbwiki.org)

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