4DM9		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CF0, GME, PHQ	enzyme
Gene Ontology	Chain Function Process Component B, A axonal transport of mitochon...
Primary reference	The co-crystal structure of ubiquitin carboxy-terminal hydrolase L1 (UCHL1) with a tripeptide fluoromethyl ketone (Z-VAE(OMe)-FMK)., Davies CW, Chaney J, Korbel G, Ringe D, Petsko GA, Ploegh H, Das C, Bioorg Med Chem Lett. 2012 Jun 15;22(12):3900-4. Epub 2012 May 4. PMID:22617491

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk] Biological Unit Coordinates (4dm9.pdb1.gz) 75 Kb Biological Unit Coordinates (4dm9.pdb2.gz) 76 Kb LPC: Ligand-Protein Contacts for 4DM9 CSU: Contacts of Structural Units for 4DM9 Structure Factors (143 Kb) Retrieve 4DM9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DM9 from S2C, [Save to disk] Re-refined 4dm9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DM9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4dm9] [4dm9_A] [4dm9_B] [4dm9_X] [4dm9_Y] SWISS-PROT database:

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