4DN8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, CA enzyme
Primary referenceA Unique Sugar-binding Site Mediates the Distinct Anti-influenza Activity of Pig Surfactant Protein D., van Eijk M, Rynkiewicz MJ, White MR, Hartshorn KL, Zou X, Schulten K, Luo D, Crouch EC, Cafarella TR, Head JF, Haagsman HP, Seaton BA, J Biol Chem. 2012 Aug 3;287(32):26666-77. Epub 2012 Jun 8. PMID:22685299
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (4dn8.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 4DN8
  • CSU: Contacts of Structural Units for 4DN8
  • Structure Factors (56 Kb)
  • Retrieve 4DN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4DN8 from S2C, [Save to disk]
  • Re-refined 4dn8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4DN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4dn8] [4dn8_A]
  • SWISS-PROT database:
  • Domain found in 4DN8: [CLECT ] by SMART

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