4DQO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, GAL, MAN, NAG, PCA, SIA, TYS	enzyme
Gene Ontology	Chain Function Process Component C
Primary reference	Structural basis for diverse N-glycan recognition by HIV-1-neutralizing V1-V2-directed antibody PG16., Pancera M, Shahzad-Ul-Hussan S, Doria-Rose NA, McLellan JS, Bailer RT, Dai K, Loesgen S, Louder MK, Staupe RP, Yang Y, Zhang B, Parks R, Eudailey J, Lloyd KE, Blinn J, Alam SM, Haynes BF, Amin MN, Wang LX, Burton DR, Koff WC, Nabel GJ, Mascola JR, Bewley CA, Kwong PD, Nat Struct Mol Biol. 2013 May 26. doi: 10.1038/nsmb.2600. PMID:23708607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (275 Kb) [Save to disk] Biological Unit Coordinates (4dqo.pdb1.gz) 265 Kb LPC: Ligand-Protein Contacts for 4DQO CSU: Contacts of Structural Units for 4DQO Structure Factors (215 Kb) Retrieve 4DQO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4DQO from S2C, [Save to disk] Re-refined 4dqo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DQO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4dqo] [4dqo_C] [4dqo_H] [4dqo_L] SWISS-PROT database: Domains found in 4DQO: [IG_like] [IGv ] by SMART

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