OCA Atlas for 4DZ2

4DZ2

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, FK5

enzyme

Gene

BURPS1710B

Gene
Ontology

Chain	Function	Process	Component
A, B	peptidyl-prolyl cis-trans is...

Primary reference

A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins., Begley DW, Fox D 3rd, Jenner D, Juli C, Pierce PG, Abendroth J, Muruthi M, Safford K, Anderson V, Atkins K, Barnes SR, Moen SO, Raymond AC, Stacy R, Myler PJ, Staker BL, Harmer NJ, Norville IH, Holzgrabe U, Sarkar-Tyson M, Edwards TE, Lorimer DD, Antimicrob Agents Chemother. 2014 Mar;58(3):1458-67. doi: 10.1128/AAC.01875-13., Epub 2013 Dec 23. PMID:24366729

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]

Biological Unit Coordinates (4dz2.pdb1.gz) 76 Kb

Biological Unit Coordinates (4dz2.pdb2.gz) 77 Kb

Biological Unit Coordinates (4dz2.pdb3.gz) 150 Kb

LPC: Ligand-Protein Contacts for 4DZ2

CSU: Contacts of Structural Units for 4DZ2

Structure Factors (300 Kb)

Retrieve 4DZ2 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4DZ2 from S2C, [Save to disk]

Re-refined 4dz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4DZ2 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4dz2] [4dz2_A] [4dz2_B]

SWISS-PROT database:

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