4E0Z Protelomerase tela R205A covalently complexed with substrate DNA date 2012-03-05
authors Shi, K., Aihara, H.
compound source
symmetry
R_factor
R_Free 0.2534
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.42
ligand DT, GOL, PTR enzyme
Primary referenceAn enzyme-catalyzed multistep DNA refolding mechanism in hairpin telomere formation., Shi K, Huang WM, Aihara H, PLoS Biol. 2013 Jan;11(1):e1001472. doi: 10.1371/journal.pbio.1001472. Epub 2013 , Jan 29. PMID:23382649
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (4e0z.pdb1.gz) 287 Kb
  • LPC: Ligand-Protein Contacts for 4E0Z
  • CSU: Contacts of Structural Units for 4E0Z
  • Structure Factors (210 Kb)
  • Retrieve 4E0Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4E0Z from S2C, [Save to disk]
  • Re-refined 4e0z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4E0Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4E0Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4E0Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4e0z_C] [4e0z_D] [4e0z] [4e0z_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4E0Z
  • Community annotation for 4E0Z at PDBWiki (http://pdbwiki.org)

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