4EHE	B-Raf Kinase Domain in Complex with an Aminothienopyrimidine-based Inhibitor	date	2012-04-02
authors	Voegtli, W.C.
compound		source
symmetry		R_factor R_Free 0.29572
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.30
ligand	RI8	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Potent and selective aminopyrimidine-based B-Raf inhibitors with favorable physicochemical and pharmacokinetic properties., Mathieu S, Gradl SN, Ren L, Wen Z, Aliagas I, Gunzner-Toste J, Lee W, Pulk R, Zhao G, Alicke B, Boggs JW, Buckmelter AJ, Choo EF, Dinkel V, Gloor SL, Gould SE, Hansen JD, Hastings G, Hatzivassiliou G, Laird ER, Moreno D, Ran Y, Voegtli WC, Wenglowsky S, Grina J, Rudolph J, J Med Chem. 2012 Mar 22;55(6):2869-81. doi: 10.1021/jm300016v. Epub 2012 Feb 29. PMID:22335519

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (4ehe.pdb1.gz) 88 Kb LPC: Ligand-Protein Contacts for 4EHE CSU: Contacts of Structural Units for 4EHE Structure Factors (207 Kb) Retrieve 4EHE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4EHE from S2C, [Save to disk] Re-refined 4ehe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4EHE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4EHE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4EHE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ehe_A] [4ehe_B] [4ehe] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4EHE: [STYKc ] by SMART

Other resources with information on 4EHE

Community annotation for 4EHE at PDBWiki (http://pdbwiki.org)

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