4EJQ Transport Protein date Apr 06, 2012
title Crystal Structure Of Kif1a C-Cc1-Fha
authors L.Huo, Y.Yue, J.Ren, J.Yu, J.Liu, Y.Yu, F.Ye, T.Xu, M.Zhang, W.Feng
compound source
Molecule: Kinesin-Like Protein Kif1a
Chain: A, B, C, D, E, F, G, H
Fragment: C-Cc1-Fha, Unp Residues 458-607
Synonym: Axonal Transporter Of Synaptic Vesicles, Microtubu Motor Kif1a, Unc-104- And Kif1a-Related Protein, Hunc-104;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kif1a, Atsv, C2orf20
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
symmetry Space Group: P 1
R_factor 0.187 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.945 57.844 110.394 89.98 89.96 90.63
method X-Ray Diffractionresolution 1.89 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceThe CC1-FHA Tandem as a Central Hub for Controlling the Dimerization and Activation of Kinesin-3 KIF1A., Huo L, Yue Y, Ren J, Yu J, Liu J, Yu Y, Ye F, Xu T, Zhang M, Feng W, Structure. 2012 Sep 5;20(9):1550-61. Epub 2012 Aug 2. PMID:22863567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (409 Kb) [Save to disk]
  • Biological Unit Coordinates (4ejq.pdb1.gz) 101 Kb
  • Biological Unit Coordinates (4ejq.pdb2.gz) 103 Kb
  • Biological Unit Coordinates (4ejq.pdb3.gz) 103 Kb
  • Biological Unit Coordinates (4ejq.pdb4.gz) 102 Kb
  • CSU: Contacts of Structural Units for 4EJQ
  • Structure Factors (1077 Kb)
  • Retrieve 4EJQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4EJQ from S2C, [Save to disk]
  • Re-refined 4ejq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4EJQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4EJQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4EJQ, from MSDmotif at EBI
  • Fold representative 4ejq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ejq_H] [4ejq] [4ejq_E] [4ejq_D] [4ejq_C] [4ejq_F] [4ejq_A] [4ejq_G] [4ejq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4EJQ: [FHA ] by SMART
  • Other resources with information on 4EJQ
  • Community annotation for 4EJQ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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